Changed the resistance on the module, for the driver's side window and works perfectly now.
So, this is the way to go. It allows you to vent, auto-up/down for both windows, etc. It interfaces well with my DEI alarm, but only needs a couple of signals from the alarm, so may be easily used with other aftermarket alarms. Just uses the "Ground while armed," and an AUX signal wires (2 connections).
I used the "Type B" diagram to wire the driver's side and then did the same for the passenger door. However, I ended up having to reverse the up/down wires for the motor on the passenger side. Before, the window would go the opposite direction of what you pressed on the switch. I assume because of the stock window module/controls.
basically run 4 wires into each door. I used 14 gauge for all of them, but you only need 2 of 'em in each door (for the motor connections) and the other 2 (for the switch connections) can be maybe 18 guage.
About $48 shipped off of Ebay.