Incoming wall of text...
Brakes have a few performance characteristics to consider:
-Braking Torque
-Heat Capacity
-Heat Dissipation
-Inertia
-Brake Balance
Which of these are you trying to improve? Until you know what you're trying to improve you might as well just throw racing stickers on the car.
If you're goal is autocross performance you should think about this:
-The stock mk3 brakes have sufficient torque in low speed situations. More grabbing power isn't needed with a well maintained factory set up in low speed situations like auto-X. (Even with completely factory components you can lock up the tires pretty easy)
-Heat capacity (major contributor to brake fade) is a concern on the mk3 Supra. I've had nearly no brakes before on a mountain run due to extreme brake fade. I wasn't pushing the car
that hard. Scary stuff.
-You need more rotor material or a different rotor/pad material to significantly change your heat capacity.
-More rotor mass can actually steal power and make your car slower. Even BBK kits which are LIGHTER can REDUCE power to the ground due to the increased inertia of the larger diameter rotor. This has been covered on many, many articles and shows. Dyno results prove it. 5% power reduction is common, even in high dollar, lightweight BBKs. Spinning more mass or mass further from the center of the wheel takes a surprising amount of power. Improved brakes performance comes at a cost to acceleration in most all cases.
-More pistons in your caliper will serve to improve braking torque. Do you need more braking torque? Unless you have an unusually weak leg, I doubt it.
-Brake balance is important. Beefing up the rear brakes alone is a bad idea. Beefing up the front brakes alone is a bad idea. Locking up the rears before the front is awful from a performance standpoint. Be careful "upgrading" the rears without increasing your braking torque up front to match. Approximately 70-75% of a car's braking power is up front. The rear brakes only take up 25-30% of the braking equation, but if they lock up before the fronts they ruin the entire braking system.
But hey, don't take my word for it, check out some tech docs from StopTech.
Index:
http://www.stoptech.com/technical-support/technical-white-papers
Brake Balance:
http://www.stoptech.com/technical-s...ias-and-performance-why-brake-balance-matters
There is a very good reason there are no easy ways to improve the Supra factory brakes before going to a BBK. The factory mk3 brakes do the job well with the space allowed. If you want to do better you need to shell out a LOT of $$ for carbon/ceramic or get very fancy with some extremely thick rotors and extremely wide calipers/pads. Again, keep in mind any extra rotor material WILL hurt your acceleration. I argue the acceleration change will be more noticeable than any improved braking.
If you're determined to find new solutions, that's awesome, but understand you are having trouble getting anywhere because many, many others have been down this path before and not found a meaningful solution within the 16" wheels. I know we sound like a broken record, but my vote is yet another for sticking to the factory aftermarket parts or go all out with a BBK and bigger wheels. Anything else will cost more time and money and get you less performance.
I greatly improved my braking performance simply with StopTech street performance pads on Brembo blank rotors with fresh DOT4/5 fluid. Even better factory sized options exist for the rotors, pads and of course fluid.
My advice (even though you didn't ask for it) is to get high quality aftermarket pads and rotors in the factory size and spend all the money you saved by avoiding custom, half-upgrades on tires.