good luck with that, another thing to check just in case, if your fuel pump is on the way out, you will hit what feels like boost cut.
it happened to me, sometimes 20 y/o pumps just get tired. as for shimming the wastegate, some people say its ok, some say its not. i would actually bet that just my saying that will cause an argument.
what that does is allow for "boost creep" which IMO is ok if kept in check, but if you have a shit load of washers back there will eventually do dammage, and cause boost cut, if you dont have correct supporting mods. i myself had a very small shim on my wastegate, and even at full throttle in 5th gear on the highway, the most i saw was 10 PSI, maybe 11 on a very cold day.
if your gauge is reading full boost at idle, there is something wrong, likely it is grounded out somewhere. but aftermarket gauges are quite cheap, easy to install, and much more accurate, so that may be your best bet.
as for the lexus AFM, an improperly tuned AFM without supporting mods can lead to trouble, so be careful and watch those A/F ratios.