I have a lot to say, take with a grain of salt as it tracks many places. The bold is the point of the post
My misunderstanding, i had the impression your using the lexus afm with your 550s.
What brand and plug type are you working with?
I recently went from autolite 3933?s to try ngk 2330 (BCPR6ES) plugs and the idle popping i have got more frequent.
I think its time for me to change my wires, and do different plugs, say, ngk4644s this time around.
Turbobob is the man and its awesome to have had his full attention on the maft-pro as long as he did.
I didn't know your still running version 4.4. Update to at least 4.65, you'll see that the engine hesitation on tipping in the throttle will be just about gone.
jeeves on fullthrottletech noted that your MAP is -14.xx, which shouldn't affect the maft outputs as long as the maft is set to get its readings from other sources.
Back to engine occilation,
I still get the impression that the ECU is getting 2 signals causing your situation. As if your afm is going straight to the ecu, but then you tee'd in the green wire from the maft too, which is causing the ecu confusion.
What is your Aux1 readings like?
Looking at the fullthrottletech screenshot jeeves put up shows me that other than the occilation MAP shows, the ecu has good control in closed loop to maintain stoich fuel mixture until it goes to open loop mode where full rich is what happens. It might not be so rich now that code 24 is not an issue.
I thought that to use afc mode the maft's yellow wire intercepts the KS wire (light green) from the afm, then the maft 'alters' the signal, and then the maft sends the signal on its way using the green wire connecting back into KS wire to the ecu.
As in the maft is a bridge in the break of the KS wire, if you get my drift.
OR
maybe, assuming the maft is correctly wired, the maft is set to receive its input from 2 different sources that don't correlate. Which means you should check its settings to make sure that its not reading/integrating/sending MAP signals when you aren't using it.
I pulled my maft manual and got myself all confused again LOL, more studying to do