ks is the actual karman signal back to the ecu that tells it how much air is being read (then the ecu decides how much fuel to add). E1 is the ground for the afm meter and VC is the intial 5v power suplly that gives the afm power to work with (totally dead with out it).
pull the afm conector and with the key in the on postion (car off) put your volt meter test leads on E1 and VC, should be a solid 5v or around there.
plug the connector back in and strip some wire insulation back on the KS and E1 wires. you need to be able to read HZ. put your test leads across the two exsposed wires and with the car running at idle it should be around 15-20hz. it will increase with rpm so a cold idle will read higher then a warm idle. (my multimeter reads khz, move the decimal 3 to the right and you have your hz reading)
http://www.cygnusx1.net/Supra/Library/TSRM/MK3/manual.aspx?Section=FI&P=96
what finally fixed mine, so far, was pulling all the wires out of the afm connector and spray the hell out of it with carb/brake cleaner. make sure to remove the oval rubber gasket that sits down in it though! and make sure to mark each wire in relation to where it goes on the connector as you pull them out. i pulled 4 out with out paying attention and got a few mixed around.