Another update here. I threw some MSD plug wires on there. It helped a bit, but there's still a lot of missing. Finally convinced my dad to drive it, and this is what he noticed:
Under 3200 (or so) rpms, the car misses pretty bad, still kind of a sputter. At the really low rpms (2000 and below) it misses really bad.
Every now and then, when you start the car at an idle, it will idle very rough, lobing and hunting. From the smell the car was giving off, he proposed that it must be running pretty rich. We plan to replace the O2 sensor tonight, but we think that there might be more involved here.
I noticed that my injectors are yellow tipped, and thus I'm guessing they are the low impedance ones. But that I may be missing the injector resistance pack. There's some blank screw holes right above the drivers side strut tower, with nothing there. Would a missing resistance pack cause any of these symptoms, or simply burn up the injectors over a period of time?
I'm looking at trying to bypass the relay for the fuel pump to see if its a bad relay. Come to think of it, if fuel pressure may be the culprit, could be fuel pump be stuck on "high" and be dumping too much fuel into the motor at the lower rpms? I don't know if the switch from running like shit to completely smooth would be instantaneous though.
Above 3200 rpms, the engine smooths out, pulls like hell, and barely misses.
In 1st, 2nd, and 3rd gears it pulls alright throughout the rpm ranges. In 4th and 5th, you really have to floor it to get a proper response from the car. Once the ACIS kicks in, or whatever is helping it out, it responds pretty well.
The hunting idle seems to be the worst after the car has warmed up. When the car starts cold, it misfires, but the motor does not have a lobe/hunt to it. We have replaced the AFM.
So either it's not getting adequate fuel, or something is causing the thing to run stupidly rich, at least sometimes. again, any ideas guys?
-edit- Did a little bit more searching, could be fuel pressure? Guess we'll try and check that.